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International Journal of
Botany Studies
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VOL. 9, ISSUE 4 (2024)
Selection of reliable reference genes for quantitative real -time PCR of salt responsive genes in three kodo millet (Paspalum scrobiculatum) accessions against Abiotic Stress conditions
Authors
Prasanthi Kumari R, Vishnuvardhan Z, Babu K
Abstract

Kodo millet is the hardiest crop among the small millets. The crop harvested as a cereal in West Africa and in India. Kodo millet is ability to tolerate the biotic and abiotic stresses. The crop is subjected to salinity stress at germination, flowering and grain filling stages which leads to the low yields. Therefore, the best option for crop production, yield improvement under salinity stress is to develop stress tolerant crop varieties. It is important to study the response of Kodo millet varieties at molecular level for better development of salinity tolerant lines.

Quantitative real-time polymerase chain reaction (RT-qPCR) using a stable reference gene is widely used for gene expression research. For any successful molecular analysis especially for qRT-PCR studies, the extraction of pure RNA is mandatory. we have used LiCl2 method through which we produced pure RNA for gene expression studies. A total of 19 salt stress responsive gene primers are used.

Among all the test accessions IC – 426676 reported high expression levels of all the genes tested which correlates with their existence against salt stress. Whereas, the accession IPS 351 showed moderately tolerant towards saline stress condition. But the accession IPS 145 recorded very poor expression levels which correlate with its phenotypic existence. Hence this accession can be recommended as suitable to grow under salt stress conditions. Further, IC 426676 germplasm has a scope to exploit them in future plant breeding and transgenic experiments to improve salt tolerant kodo millet germplasm.
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Pages:6-11
How to cite this article:
Prasanthi Kumari R, Vishnuvardhan Z, Babu K "Selection of reliable reference genes for quantitative real -time PCR of salt responsive genes in three kodo millet (<i>Paspalum scrobiculatum)</i> accessions against Abiotic Stress conditions". International Journal of Botany Studies, Vol 9, Issue 4, 2024, Pages 6-11
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